SRR3128207.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128207.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2407473
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40068	1.6643177306661383	No Hit
CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG	4339	0.1802304740281615	No Hit
CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC	4213	0.1749967704726076	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCAAGGAGCT	3561	0.1479144314391065	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3514	0.14596217693822527	No Hit
GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG	3323	0.13802854694528247	No Hit
CGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCT	2873	0.11933674853258998	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2757	0.11451841827509592	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2554	0.10608634032448132	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	12250	88.29615	1
TAGGGCA	1195	77.86778	4
ATAGGGC	1415	74.0643	3
TCCGTAC	1735	73.40579	2
TAGGGTA	730	73.390945	4
GAATAGG	1295	73.38722	1
CGTACAC	1715	73.165726	4
CCGTACA	1725	73.014015	3
CGTAGGG	690	72.87779	2
GGTAAGG	1465	72.57877	1
ATAGGGA	2115	72.21602	3
AGATAGG	1265	71.40844	1
AGTAGGG	3925	69.32652	2
ATCCGTA	1860	69.053955	1
TAAGGGA	2255	68.774574	3
GTAGGGC	930	68.72528	3
AGGGCAT	1990	68.72274	5
AGGGATG	3350	68.459785	5
AGTAAGG	1425	68.34304	1
AGTACGG	435	68.138115	1