SRR3128168.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128168.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1859134
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20808	1.1192307816434963	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTGTCAAAG	8957	0.4817834540167627	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	5414	0.29121085408582703	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	5360	0.288306275932773	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	5259	0.28287363901687557	No Hit
GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	5138	0.2763652324146619	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATG	2669	0.1435614646389125	No Hit
ATCCGTACACCCACACCTGTCTCTTATACACATCTGACGCTGTCAAAGTC	2106	0.1132785479691082	No Hit
AGAGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	1914	0.10295115898047155	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8090	84.98141	1
ATCCGTA	3850	77.73536	1
TACGAGG	370	77.58009	1
CGTACAC	3750	77.073494	4
TCCGTAC	3870	76.99092	2
CCGTACA	3770	76.91393	3
GTACGGG	330	76.9026	2
CGAAGGG	1645	76.850655	2
ATAGCGG	325	76.73875	1
TACGGGT	120	74.410385	3
TAGGGCA	985	73.95315	4
AAGGGCG	695	73.70601	4
ATAACGG	160	73.52622	1
TAGGGAT	1235	72.68213	4
CGTAGGG	480	72.45222	2
ATAGGGC	985	72.044685	3
ACGGGTA	170	71.87628	4
TATAGGG	1320	71.56215	2
GAATAGG	955	71.44747	1
AAGGGTA	1290	71.40482	4