SRR3128155.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128155.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1334812
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18702	1.4010961843315763	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	5784	0.4333194487313569	No Hit
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	5519	0.4134664656895503	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCTATCGT	4773	0.35757844550393614	No Hit
GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	4534	0.33967330230774073	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2760	0.2067706913033446	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	1604	0.12016673509078432	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1528	0.11447304938822846	No Hit
ACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	1426	0.10683152384006137	No Hit
AGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	1377	0.10316059490025561	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATG	1364	0.10218667497745	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7770	88.22902	1
CGTAGGG	330	81.18754	2
TAGCGGG	615	77.956726	2
TAAGGGA	1170	75.92844	3
ATAGGGA	1235	74.976944	3
AGTAGGG	2180	72.87669	2
ACGGGTA	110	72.64149	4
AGGGTAC	690	72.20799	5
GTAGGGT	530	71.83526	3
TAGGGCA	600	69.72158	4
AGGGATC	1265	69.48316	5
AGGGATG	1435	69.11289	5
AGTAAGG	885	69.0677	1
GGTAAGG	690	68.82516	1
GTAGGGC	555	68.599434	3
AGGGAAT	1330	68.561226	5
GAGGGAT	1530	68.20089	4
TAGAGGG	1970	67.52253	2
TAGGGAC	585	67.49194	4
AAGCGGG	1505	67.1476	2