SRR3128154.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128154.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1162262
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16416	1.4124181983064061	No Hit
CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC	4639	0.39913547891955514	No Hit
CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	4496	0.38683188472134505	No Hit
GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTG	3758	0.3233350139641492	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCTATCGT	2543	0.21879748283949746	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT	1452	0.1249288026279789	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1435	0.12346613758343644	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1406	0.12097100309568755	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6010	87.39626	1
AGGGTAC	575	82.55429	5
CGTAGGG	290	79.49373	2
TAGCGGG	475	77.25663	2
AGTAGGG	1810	72.780365	2
TAAGGGA	1030	71.71288	3
TAACGGG	315	71.69114	2
TAGAGGG	1775	71.299866	2
TAGTAGG	470	71.09902	1
ATAAGGG	1520	70.880486	2
ATAGGGA	1200	69.78684	3
GTAGGGT	455	69.27846	3
GAGGGTA	625	69.25364	4
AGGGATC	1050	68.93148	5
GAATAGG	650	68.78811	1
TAAGGGT	460	68.52543	3
ACGGGTA	110	68.43245	4
AGGGATG	1325	68.10382	5
GTAGGGC	560	68.05057	3
TACGGGT	90	67.95722	3