SRR3128152.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128152.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1469549
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18489	1.2581411031547773	No Hit
CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC	6321	0.43013196565749084	TruSeq Adapter, Index 15 (95% over 23bp)
CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG	5525	0.37596568743199443	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTACCAGTA	5305	0.36099510802293766	No Hit
GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG	4429	0.30138498273960246	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2999	0.2040762165807333	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1934	0.1316050026232538	No Hit
CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT	1641	0.11166691277391907	TruSeq Adapter, Index 15 (95% over 21bp)
AGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT	1516	0.1031609017460459	TruSeq Adapter, Index 15 (95% over 21bp)

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7545	85.70903	1
AGGGTAC	785	73.04533	5
ACGGGAT	370	72.4086	4
TAGCGGG	580	72.12387	2
TCCGTAC	2280	71.74001	2
CCGTACA	2230	71.66235	3
CGTACAC	2210	71.46017	4
ATAGGGC	995	71.32978	3
ATCCGTA	2310	71.05531	1
AGTAGGG	2055	70.67465	2
GAATAGG	855	70.40881	1
TAGACGG	155	69.78776	1
ATTACGG	95	69.30867	1
AATAGGG	2165	68.82059	2
AGGGCAT	1270	68.46526	5
TAGGGCG	330	68.36665	4
AAGGGTA	1010	67.94359	4
GGTAAGG	815	67.51673	1
TAAGGGA	1100	67.51207	3
ATAGGGA	1185	67.42914	3