SRR3128151.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128151.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1289686
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15968	1.238130831845891	No Hit
CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC	4941	0.3831165105304702	TruSeq Adapter, Index 15 (95% over 23bp)
CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG	4651	0.360630417016235	No Hit
GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG	3665	0.28417769906783513	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCTACCAGTA	2887	0.22385293784688678	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1666	0.12917873032660662	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1610	0.1248365881307543	No Hit
CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT	1480	0.11475661517609713	TruSeq Adapter, Index 15 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6345	87.18535	1
TACGAGG	275	73.616135	1
ATAGGGC	730	73.49378	3
GTAGGGA	890	72.972244	3
TAGGGCA	660	72.73189	4
ATAGCGG	185	71.25635	1
ACGGGAT	370	71.22868	4
AGTAGGG	1925	71.14278	2
TAGGGCG	215	70.04549	4
TAGCGGG	475	69.35424	2
TAGGGTA	550	69.309204	4
AGGGTAC	635	68.834305	5
TAAGGGA	1150	68.75117	3
CGGGTAT	110	68.363304	5
AGGGCTC	1130	68.21206	5
GGTAAGG	610	67.918816	1
TAGTAGG	500	67.79532	1
GTACGGG	320	67.65135	2
AGGGATG	1365	67.48685	5
AGGGCAT	1180	66.91492	5