SRR3128149.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128149.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1765489
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22481	1.2733582593830945	No Hit
CTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC	4728	0.2678011587724421	Illumina Single End Adapter 1 (95% over 22bp)
CCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG	4395	0.24893952893504293	Illumina Single End Adapter 1 (95% over 21bp)
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTGTGAGA	3906	0.22124182025489822	No Hit
GCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG	3872	0.21931600819942804	Illumina Single End Adapter 1 (95% over 21bp)
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3453	0.1955832066923102	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2663	0.15083639716815003	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7800	85.962135	1
TAGGGCA	1090	74.16721	4
GGTAAGG	1125	73.56012	1
ATAGGGC	1000	72.85204	3
CGTAGGG	645	70.68415	2
TATAGGG	1430	70.66632	2
AGTAGGG	3140	70.651665	2
AGGGATG	2010	69.915405	5
GTAGGGC	855	69.81482	3
ATAGGGA	1455	69.77515	3
AGGGTAA	1090	68.9908	5
AGGGCAT	1670	67.54489	5
TAGGGTA	850	67.46072	4
CCGTACA	1890	67.393425	3
GAGGGAT	1845	67.25392	4
TAGAGGG	3270	67.12421	2
TCCGTAC	1975	66.872765	2
ATCCGTA	2000	66.76835	1
TGTAGGG	1325	66.68866	2
CGAAGGG	1485	66.466515	2