SRR3128144.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128144.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1543974
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19340	1.2526117667784562	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGAGCTCCA	8290	0.5369261399479525	No Hit
CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC	4160	0.2694345889244249	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	4131	0.26755631895355747	No Hit
CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	4019	0.2603023107902076	No Hit
GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	3689	0.2389288938803374	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATG	2252	0.14585737842735694	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2153	0.13944535335439587	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2052	0.13290379242137498	No Hit
ATCCGTACACCCACACCTGTCTCTTATACACATCTGACGCGAGCTCCATC	1786	0.11567552303341896	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7190	86.16328	1
TAGGGTA	430	78.69287	4
CCGTACA	3465	78.39638	3
TCCGTAC	3635	77.44507	2
CGTACAC	3520	76.9044	4
CGTAGGG	545	76.74761	2
ATCCGTA	3755	75.91507	1
GTACGGG	320	73.43302	2
TAGGGCA	705	71.995605	4
TACACCC	3565	71.97878	6
TATAGGG	1120	71.33493	2
TAGGGAC	860	70.4957	4
GTACACC	3830	69.94351	5
ATAGCGG	270	69.688576	1
AGGGATG	1950	69.65217	5
GTAGGGA	1285	69.48992	3
AATGCGG	305	69.40297	1
ATAGGGA	1430	69.34542	3
GAATAGG	1000	69.14848	1
AGTAGGG	2130	69.061516	2