SRR3128143.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128143.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1715440
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23648	1.3785384507764773	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGAGCTCCA	4980	0.2903045282842886	No Hit
CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	4412	0.2571934897169239	No Hit
CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC	4242	0.24728349577950848	No Hit
GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	3986	0.23236021079140046	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2975	0.17342489390477078	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2448	0.14270391269878283	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2443	0.14241244228885885	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8425	85.71119	1
CGTAGGG	655	78.21455	2
AGTACGG	195	77.14923	1
TAGGGTA	500	77.080795	4
GAATAGG	935	76.42725	1
GGTAAGG	1065	75.04393	1
AGTAGGG	2675	73.09234	2
AGGGCAT	1445	72.20835	5
GTACGGG	300	72.067406	2
AGGGATG	2495	70.26525	5
TAGGGCA	870	70.230606	4
GTAGGGA	1570	70.051674	3
TAGGGAC	960	70.01114	4
AGTAAGG	925	69.62979	1
TAAGGGA	1605	69.40258	3
ATAAGGG	2490	68.896286	2
TAGCGGG	820	68.78119	2
ATAGGGA	1610	68.01933	3
GACCGAT	140	67.13963	8
TGAAGGG	3030	67.01059	2