SRR3128142.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128142.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1445119
Sequences flagged as poor quality	0
Sequence length	100
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20510	1.4192602823712095	No Hit
CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	3905	0.2702199611243088	No Hit
CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC	3716	0.25714145340279937	No Hit
GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG	3428	0.23721229877954686	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGAGCTCCA	2537	0.1755564766638595	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2097	0.14510915710055713	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1959	0.13555977051024864	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1533	0.10608122929668769	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7455	87.051285	1
GTACGGG	265	83.45172	2
TACGGGT	95	79.24643	3
TAGGGTA	530	76.34945	4
ATAGCGG	335	75.85907	1
ACGGGTC	125	75.28411	4
AGTAGGG	2165	75.197174	2
TAAGGGA	1255	74.23433	3
AGTACGG	165	74.15628	1
CGTAGGG	465	73.86747	2
TAGGGAC	820	72.8741	4
TGTAGGG	860	71.673096	2
AGGGCAT	1105	71.4602	5
AGGGATG	2125	71.443184	5
ACGGGAT	515	71.264084	4
AGGGTAT	780	71.10573	5
ATAGGGA	1390	70.40959	3
TAGCGGG	725	70.092094	2
TAGGGCA	800	69.99069	4
GTAGGGA	1120	69.738625	3