SRR3128140.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128140.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1386793
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19415	1.3999926449008613	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTG	5105	0.36811550101565266	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	4617	0.33292639925352957	No Hit
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTG	4215	0.30393865558882976	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCTACGCA	4024	0.29016587190734305	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	2681	0.1933237332464182	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2563	0.18481489306623267	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	1649	0.11890743607733814	No Hit
AGAGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTT	1488	0.10729791684844098	No Hit
AGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	1416	0.1021060821622261	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7600	87.75064	1
ATAACGG	105	80.62521	1
TAGCGGG	640	77.116325	2
CGTAGGG	270	76.5995	2
AGGGCAT	1320	76.19834	5
AGGGATG	2560	75.64199	5
AGTAGGG	1985	75.064705	2
GTACGGG	335	74.36491	2
TAAGGGA	1210	73.03138	3
AAGGGAT	2705	72.97729	4
TAGGGCA	980	71.94008	4
GGTAAGG	665	71.431114	1
TAGGGTA	390	71.10384	4
AGAGGGC	1660	71.07267	3
TAGAGGG	2265	70.97328	2
GGATGGC	2020	70.96663	7
AGGGTAC	590	70.89958	5
AAGGGTA	770	70.80647	4
AGTACGG	180	70.54706	1
CGAAGGG	1235	70.4112	2