SRR3128139.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128139.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1191589
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16994	1.426162879986304	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTG	4292	0.36019130757333273	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	4052	0.3400501347360541	No Hit
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTG	3522	0.29557171138706384	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2029	0.17027683202849303	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCCCTACGCA	1970	0.16532546037266205	No Hit
CGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	1453	0.12193801721902434	No Hit
AGAGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTT	1326	0.11127997992596439	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1303	0.1093497841957252	No Hit
AGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	1262	0.10590900050269011	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6405	86.941185	1
ACGGGTA	120	82.35817	4
AGGGATG	2020	78.408585	5
TAGGGCA	695	77.194916	4
TAGCGGG	520	76.927956	2
AAGGGCG	465	76.91823	4
AGGGCAT	1065	76.786476	5
CGAAGGG	1010	75.48528	2
GTACGGG	300	75.2989	2
AATGCGG	195	74.83193	1
TAGAGGG	1945	74.76658	2
CGTAGGG	190	74.30813	2
AAGGGCA	1650	73.01712	4
GAGGGAT	1955	72.9398	4
TAGGGTA	310	72.8699	4
AAGGGAT	2280	72.65684	4
ATAACGG	130	72.418	1
ATAGCGG	170	71.99201	1
AGAGGGA	3030	71.757614	3
TAGACGG	185	71.24366	1