SRR3128138.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128138.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1970301
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	25964	1.3177681988691068	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTCTGTAT	7874	0.3996343705860171	No Hit
CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC	6508	0.33030486204899656	No Hit
CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	5906	0.2997511547727987	No Hit
GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	5585	0.2834592278032646	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	5496	0.2789421514783782	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATG	2316	0.11754549178018994	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2237	0.1135359521210211	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTT	2057	0.10440029213810478	No Hit
AGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCT	1994	0.10120281114408408	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8640	81.94749	1
AGGGTAC	1075	79.128136	5
AATGCGG	400	77.624146	1
GAATAGG	1185	74.636696	1
AAGGGTA	1440	74.41032	4
AGTAGGG	2790	73.27332	2
CCGTACA	3150	73.10487	3
ATAGGGC	950	72.72011	3
CGTACAC	3160	72.27864	4
GTAGGGT	840	72.17242	3
CGTAGGG	560	72.17242	2
TAGGGTA	840	71.61294	4
TAGCGGG	935	71.37359	2
TCCGTAC	3355	71.29943	2
TAAGGGT	650	70.85549	3
ATAGGGA	1785	70.82308	3
GTAGGGA	1440	70.82034	3
TACGGGT	120	70.49399	3
ATAAGGG	2415	69.861534	2
ATCCGTA	3465	69.650955	1