SRR3128137.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128137.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2178681
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31986	1.4681359960453138	No Hit
CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC	7428	0.3409402294323951	No Hit
CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	6490	0.297886657110426	No Hit
GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG	5983	0.2746156963777625	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTCTGTAT	4622	0.212146707113157	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3765	0.172810980588714	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2669	0.12250531399502727	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTT	2213	0.10157521913488023	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10755	82.75776	1
AGGGTAC	1335	79.56759	5
TAGGGTA	1020	74.18817	4
TAAGGGA	1640	72.79455	3
GTAGGGT	1075	71.70416	3
ATAGCGG	460	71.54984	1
ATAGGGC	1110	71.136955	3
ATAGGGT	865	70.094284	3
GTAGGGA	1505	69.95528	3
CGTAGGG	525	69.83037	2
GATTAGG	505	69.82941	1
GGGTACC	1570	69.75338	6
AAGGGTA	1645	69.14463	4
GAGGGTA	1240	68.98564	4
ATAGGGA	1915	68.72239	3
TAGCGGG	900	68.412865	2
ATGCGGG	1230	68.40013	2
AATGCGG	530	68.30985	1
AGTAGGG	3340	68.109535	2
TAGGGTC	580	68.07071	4