SRR3128130.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128130.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1062832
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15779	1.4846184533397564	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	3856	0.3628042813916028	No Hit
CTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTGC	3856	0.3628042813916028	No Hit
GCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	2935	0.27614900567540307	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGTCGTTGA	2879	0.27088006382946694	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT	1317	0.12391422162674814	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1258	0.11836301503906543	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGG	1094	0.10293254249025247	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1092	0.10274436599575475	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6650	84.79898	1
ATAGCGG	215	81.07397	1
CGTAGGG	320	75.04704	2
TAGCGGG	505	74.59539	2
TAGAGGG	1480	73.177826	2
TACACGG	110	72.807205	1
AGGGTAC	440	72.64618	5
TAGGGAC	470	72.13193	4
AAGGGTA	705	72.13192	4
GGTAAGG	630	71.7875	1
AGGGCAT	925	70.63657	5
GTAGGGA	900	69.58282	3
AGTAGGG	1595	68.492134	2
GAATAGG	600	68.31029	1
TAAGGGA	745	68.25907	3
AATAGGG	1495	68.03398	2
GTAAGGG	1280	66.95373	2
AGGGATG	1250	66.93705	5
ACGGGAT	310	66.83191	4
ACGAGGG	890	66.66439	2