SRR3128125.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128125.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1361675
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17460	1.2822442947105586	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCACGAGTCT	5916	0.4344649053555364	No Hit
CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	5855	0.42998512860998406	No Hit
CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC	5709	0.4192630400058751	No Hit
GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG	4480	0.32900655442745147	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	3053	0.22420915416674317	No Hit
CGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	1766	0.12969320873189272	No Hit
AGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT	1675	0.12301026309508509	No Hit
ATCCGTACACCCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATG	1574	0.11559292782785907	No Hit
AGAGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	1435	0.10538491196504306	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	7820	86.62861	1
CGTAGGG	360	80.94938	2
GTACGGG	260	79.54331	2
GTAGGGC	640	75.64523	3
TCCGTAC	2740	73.59208	2
GAGGGTA	900	73.11557	4
ACGGGTA	200	72.85444	4
ATCCGTA	2795	72.493576	1
AGGGTAT	895	72.473694	5
CCGTACA	2680	72.43352	3
AGGGTAC	690	72.2073	5
CGAAGGG	1175	72.00439	2
TAGGGCA	800	71.09183	4
TCACGGG	205	71.0775	2
AGGGATG	1535	70.73395	5
AGTAAGG	705	70.68395	1
CGTACAC	2745	70.547104	4
AAGGGAT	2200	70.076996	4
GTAGGGA	1065	69.73195	3
AAGGGTA	1140	69.67969	4