SRR3128117.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128117.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8673740
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	379913	4.3800367546179615	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	33887	0.39068498709899074	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT	17029	0.19632822750047843	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	16102	0.18564079624245136	No Hit
CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	15878	0.18305828858139625	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13734	0.15834000096844036	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	13420	0.15471987862213993	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	10664	0.12294581114951568	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10013	0.1154403982595743	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	9301	0.10723171319407775	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	9095	0.10485672847007173	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	106025	90.03976	1
ATAGGGC	3940	73.02431	3
TAGTAGG	2930	72.42182	1
AGGGACT	19020	71.95177	5
GACTTAA	14665	70.27503	8
ATAGGGA	5940	69.3314	3
ACTTAAT	14955	68.566635	9
AGATAGG	4530	68.44595	1
GGACTTA	15255	68.23482	7
AGTAGGG	12700	67.56301	2
GTTTTTT	143320	66.948906	2
TAGGGAT	3910	66.85175	4
ATAGAGG	5495	66.78631	1
GTAGGGA	6160	66.09209	3
AGTAAGG	5185	65.87922	1
TAGGGAC	3895	65.78151	4
GATAGGG	11870	65.474464	2
AAGGGGC	28220	65.404564	4
GGATAGG	4610	64.60458	1
AGGGATG	8940	64.102646	5