SRR3128116.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128116.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10474853
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	407514	3.8904030443195716	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	42891	0.40946636673564774	No Hit
CGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT	21358	0.20389784944953404	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT	19745	0.18849906533294547	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT	19734	0.18839405192607475	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	17690	0.1688806515948243	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	17234	0.1645273685463653	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	14396	0.13743390957371907	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	11639	0.11111373114257546	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	11038	0.1053761804580933	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	116825	90.8014	1
AGGGACT	23795	72.34418	5
ATAGGGC	4790	71.87751	3
ATAGGGA	7060	70.71513	3
ACTTAAT	17750	70.294044	9
GACTTAA	17870	70.1113	8
AGTAGGG	15455	69.4228	2
TAGTAGG	3480	68.78885	1
GGACTTA	18705	67.86084	7
GGTAAGG	5540	67.53739	1
GTTTTTT	158275	67.33959	2
ATAGAGG	6800	66.24949	1
GTAGGGA	7365	65.80423	3
AGATAGG	5110	65.75097	1
TAGGGAT	4830	65.72399	4
AAGGGGC	34350	65.70543	4
AGTAAGG	6195	65.34094	1
TATAGGG	7205	65.305374	2
GGATAGG	5665	65.298515	1
TAGGGAC	4840	65.29626	4