SRR3128114.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128114.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10524806
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	385181	3.6597444171417504	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	43103	0.4095372399263226	No Hit
CGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT	22517	0.21394218572769894	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT	20403	0.19385630480979887	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT	20016	0.19017927741375945	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	17828	0.16939029565010508	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	17314	0.16450659518094682	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	14176	0.13469131877585203	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	11629	0.11049134777401123	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	11209	0.10650077540621651	No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC	10848	0.10307078344246916	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	114010	90.79473	1
ATAGGGC	4810	74.15934	3
AGGGACT	22860	71.33824	5
TAGTAGG	3615	70.291985	1
AGTAGGG	14975	69.798164	2
GGTAAGG	5895	69.44737	1
GACTTAA	17735	69.163734	8
ATAGGGA	7070	69.13263	3
GTAGGGA	7180	68.26986	3
TAGGGAT	4725	67.83467	4
AGATAGG	5500	67.761475	1
ACTTAAT	18115	67.50533	9
GTTTTTT	155125	67.03416	2
TAGGGAC	5030	66.61787	4
GGACTTA	18830	66.31479	7
ATAGAGG	6805	65.692505	1
AAGGGGC	34330	65.45067	4
AATAGGG	13200	65.327614	2
TATAGGG	6965	65.00945	2
AGTAAGG	5840	64.38049	1