SRR3128113.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128113.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12481524
Sequences flagged as poor quality	0
Sequence length	100
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	474351	3.8004253326757214	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	51844	0.41536594409464744	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT	22134	0.1773341140072318	No Hit
CGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT	21917	0.17559554426206286	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT	21829	0.17489050215342292	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	21828	0.1748824903112793	No Hit
CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG	21093	0.16899378633570708	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	17750	0.14221019804953305	No Hit
GAGCAGGAGGCTGACAATGAGGTAGACGAAGAAGAGGAAGAAGGTGGGGA	13859	0.11103612026864668	No Hit
ATGATGGTTACAATGAAGGAGGAAATTTTGGCGGTGGTAACTATGGTGGT	13458	0.10782337156904878	No Hit
CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC	12779	0.10238333075352016	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12491	0.1000759202161531	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	136915	90.28373	1
ATAGGGC	5750	74.8161	3
AGGGACT	28105	71.39801	5
GACTTAA	21150	70.592285	8
ACTTAAT	21400	69.350365	9
AGTAGGG	18425	69.25916	2
TAGTAGG	4385	69.20293	1
ATAGGGA	8810	68.14858	3
GGACTTA	22330	68.103615	7
GGTAAGG	6875	67.748055	1
GTAGGGA	9085	67.37952	3
GTTTTTT	184795	67.16951	2
AGATAGG	6490	67.05503	1
TAGGGAT	5740	66.75638	4
AAGGGGC	41005	66.51401	4
TAGGGCA	4215	65.811455	4
TATAGGG	8970	65.68006	2
AATAGGG	15475	65.38626	2
GGATAGG	6720	65.25007	1
AGTAAGG	7165	65.00598	1