SRR3128088.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128088.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2253092
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	95446	4.23622293275197	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	8807	0.39088505928741485	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT	8769	0.38919848812210067	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	8450	0.3750401670238055	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	4849	0.21521535738442993	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC	4166	0.18490145986049394	No Hit
CGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC	3691	0.16381932029406698	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	3024	0.1342155579976317	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2607	0.1157076586308948	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2262	0.10039536778791101	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	26195	90.38118	1
CGTTTCT	1340	73.74908	1
AGGGAAT	2500	72.187874	5
ATAGGGC	1310	71.03411	3
AGGGTAC	880	69.961914	5
AAGGGTA	1425	69.918816	4
AGGGATG	3210	69.69072	5
GTAGGGT	890	68.64776	3
AGTAGGG	3410	68.51732	2
GTAGGGA	1555	68.30478	3
GTACGGG	435	68.08472	2
TAGGGTA	740	67.955574	4
GAGGGAT	2465	67.87441	4
ACGGGTA	215	67.76357	4
AGAGGGC	2965	67.68247	3
ATAGGGA	1690	67.29793	3
TAGACGG	360	66.66682	1
TAAGGGA	1575	66.54223	3
CGTAGGG	675	66.16345	2
GTTTTTT	36110	65.99228	2