SRR3128087.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128087.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2109475
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	87784	4.161414569975943	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	9942	0.47130210123371935	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT	9548	0.45262446817336066	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	9097	0.4312447409900568	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	5359	0.2540442527169082	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC	4392	0.20820346294694175	No Hit
CGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC	3908	0.1852593654819327	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	3347	0.15866507069294492	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2386	0.1131087118832885	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGT	2190	0.10381730051316085	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	23580	90.56347	1
ACGGGTA	180	80.93738	4
ATAGGGC	1350	72.06037	3
AGGGATG	2650	70.22949	5
CGTTTCT	1355	70.1218	1
AGTAGGG	3125	69.47874	2
TAGGGCA	860	69.400925	4
ATAGCGG	300	68.98782	1
AGATAGG	1095	68.73008	1
GTAGGGT	780	68.68632	3
AGAGGGC	2620	68.161995	3
ATGTAGG	525	68.09187	1
AAGGGTA	1295	67.86281	4
GTAGGGA	1395	67.714516	3
ATAGGGA	1750	67.40555	3
AGGGAAT	2280	66.785225	5
TAGCGGG	845	66.73974	2
GTTTTTT	32315	66.330894	2
CGTAGGG	585	65.874596	2
GATAGGG	2780	65.76045	2