SRR3128086.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128086.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2612029
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	124065	4.749755841148778	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT	9800	0.3751872586406966	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT	9553	0.3657310083463851	No Hit
CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	8808	0.33720911980686274	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG	5654	0.2164600775871937	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC	4667	0.178673360824095	No Hit
CGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC	4047	0.15493702405294887	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	3649	0.13969982722243895	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3057	0.11703545404740913	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2986	0.11431726064297142	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	32705	90.02628	1
ATAGGGC	1545	77.57345	3
TAGGGTC	735	74.177475	4
ACGGGTA	255	73.72609	4
AGTAGGG	4020	72.838905	2
TAGGGCA	1010	70.73325	4
AAGGGTA	1670	70.6413	4
AGGGAAT	2555	70.26794	5
AGATAGG	1450	70.063995	1
AGGGATG	3760	69.872894	5
GTACGGG	500	69.56056	2
ATAGGGA	2210	68.054855	3
AGGGTAC	1095	67.8153	5
CGTTTCT	1555	67.752716	1
AGTTAGG	675	67.589165	1
CGTAGGG	790	67.22839	2
ATGCGGG	1275	67.09074	2
GAGGGAT	2985	66.76101	4
GTAGGGT	1190	66.74844	3
GTTTTTT	44435	66.53143	2