SRR3128085.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128085.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1375291
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12987	0.9443092407352335	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	7080	0.5148001404793603	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	5392	0.39206247986789705	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	5013	0.3645046757377166	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	4765	0.34647212844408926	No Hit
AGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	2026	0.14731427748745538	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT	1941	0.14113376732633312	No Hit
CGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	1696	0.12331935568545131	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCT	1683	0.12237410119022084	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGGG	1645	0.11961104958877794	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT	1563	0.11364867508040118	No Hit
GGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	1528	0.11110375913170377	No Hit
ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	1402	0.10194206171639311	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCTACG	1390	86.55723	3
AGGGATG	4060	86.00842	5
GGATGGC	3470	83.70226	7
CGTTTTT	4280	83.12373	1
GCTACGA	1450	82.975555	4
CGTAGGG	335	82.802475	2
AGGGAAT	2760	82.24628	5
TAGGGCG	195	81.94501	4
ACGACCA	1450	80.70669	7
AGGGCGT	210	80.56779	5
GATGGCA	3345	80.367065	8
TCCGCTA	1495	80.268654	1
TAAGCGG	260	79.6391	1
CGGGATG	710	79.43302	5
AGAGGGC	1655	78.661095	3
ATGGCAC	3365	78.6324	9
GAGGGAT	2740	78.38696	4
CTACGAC	1535	78.38081	5
TAGCGGG	470	78.02484	2
GGGATGG	4085	77.88877	6