SRR3128083.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128083.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1547654
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17558	1.1344913010272322	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8231	0.5318372194301827	No Hit
CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	5715	0.3692685832879959	No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC	5666	0.366102500946594	No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	5604	0.3620964375758406	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT	2228	0.14395982564578388	No Hit
AGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	2088	0.13491387609892133	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCT	1924	0.12431719234402522	No Hit
CGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	1755	0.11339743896245542	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGGG	1704	0.11010212877038408	No Hit
ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG	1683	0.1087452363383547	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTT	1572	0.10157309062619939	No Hit
ACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT	1563	0.10099156529818681	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAGCGG	270	87.11426	1
CGTTTTT	5310	86.198814	1
AGGGATG	4720	85.63403	5
GCTACGA	1495	83.62389	4
CGCTACG	1500	82.7185	3
GGATGGC	3945	82.20382	7
GATGGCA	3695	81.53302	8
TAGCGGG	615	81.00926	2
CTACGAC	1550	80.65659	5
AGTAAGG	830	80.48097	1
AGAGGGC	1850	80.279625	3
TAAGGGA	1725	79.83043	3
CGGGATG	895	79.29465	5
CGTAGGG	500	78.96111	2
AAGGGCA	2010	78.79956	4
ACGACCA	1545	78.78821	7
ATGGCAC	3785	78.72512	9
AGGGTAG	850	78.51622	5
AAGGGAT	4200	78.3319	4
AAGGGTA	1435	78.27732	4