SRR3128081.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128081.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1141359
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10833	0.949131693008072	No Hit
CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	4275	0.37455349280988715	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG	4150	0.3636016362949782	No Hit
CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC	3816	0.33433827568714136	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	1553	0.13606586534122916	No Hit
AGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCT	1533	0.13431356829884375	No Hit
CGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCT	1465	0.12835575835473326	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTT	1280	0.11214701071266797	No Hit
AGAGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTT	1170	0.10250937697954808	No Hit
GGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCT	1163	0.10189607301471315	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGA	85	0.0	93.99251	7
GGTACCG	55	0.0	85.44774	7
CGTTTTT	3285	0.0	83.31022	1
TACGGGT	150	0.0	81.456604	3
CGTAGGG	275	0.0	80.31735	2
TAGCGGG	465	0.0	79.8396	2
AGGGAAT	2040	0.0	78.09671	5
TAACGGG	325	0.0	78.082664	2
CGAAGGG	970	0.0	77.03172	2
GTACGAT	55	1.8189894E-12	76.90296	8
AAGGGTA	1130	0.0	76.105644	4
AGGGTAC	730	0.0	75.966545	5
TAAGCGG	330	0.0	75.52184	1
AGAGGGC	1320	0.0	75.475525	3
AGGGTGC	850	0.0	74.08821	5
AGGGATG	1950	0.0	73.988976	5
ATAGAGG	690	0.0	73.60127	1
ATAGGGT	870	0.0	73.46219	3
AGGGCAT	845	0.0	72.8581	5
TAGGGCG	155	0.0	72.765205	4