SRR3128066.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128066.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	875069
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8225	0.9399258801305954	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	3782	0.4321944898059467	No Hit
GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG	3775	0.43139455288668666	No Hit
CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG	3218	0.3677424294541345	No Hit
CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	3130	0.3576860796120077	No Hit
AGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT	1359	0.1553020390392072	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTT	1259	0.14387436876406318	No Hit
CGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT	1126	0.12867556729812163	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCT	1101	0.12581864972933562	No Hit
GGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT	918	0.10490601312582208	No Hit
ACTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG	915	0.10456318301756776	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGCG	905	0.10342041599005335	No Hit

$Adapter graph$

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGATG	2190	86.266846	5
CGTTTTT	2725	85.74341	1
TACACGG	55	85.47678	1
CGCTACG	675	84.240074	3
ACGGGTA	90	83.54388	4
TTACGGG	130	83.14222	2
GGATGGC	1730	82.85916	7
GGAGCTA	8575	82.432884	9
CGAAGGG	660	81.17046	2
AGGGAAT	1675	80.80526	5
TCCGCTA	705	80.68766	1
GAGGGTA	430	79.77954	4
GCGTAGG	130	79.559166	1
ATGGCAC	1590	79.21811	9
AACGAGG	285	79.1785	1
GATGGCA	1640	79.095535	8
TACGACC	715	78.879105	6
GCATAGG	155	78.85923	1
GGGGGAG	9635	78.77847	6
GATGACC	1145	78.39974	8