SRR3128051.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128051.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1962340
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	73735	3.757503796487867	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT	8311	0.4235249752846092	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT	8301	0.4230153795978271	No Hit
CGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT	7344	0.37424707237277943	No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG	5012	0.25540935821519206	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC	3938	0.20067878145479376	No Hit
CGTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC	3675	0.18727641489242436	No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC	3141	0.16006400521825984	No Hit
CGTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGT	1997	0.10176625865038677	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1982	0.10100186512021361	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	20395	90.29186	1
TAGGGCA	950	72.225945	4
CGTTTCT	1145	70.640305	1
ATAGGGC	1200	68.92795	3
AGTAGGG	2855	68.47802	2
ATAGGGA	1525	68.106155	3
AGGGATG	2495	68.000435	5
GAATAGG	985	67.79252	1
GTAGGGA	1220	67.412766	3
AGGGAAT	2065	67.13933	5
GGTAAGG	1035	66.78925	1
AGTAAGG	1155	66.77155	1
TAGAGGG	3080	66.2221	2
CGTAGGG	470	65.99485	2
AGATAGG	1085	65.87846	1
AGAGGGC	2655	65.49394	3
GTTTTTT	28330	65.22752	2
GTAAGGG	2740	65.17739	2
GATAGGG	2640	64.44194	2
AGGGACT	1985	64.39964	5