SRR3128015.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128015.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2199104
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	77023	3.5024719158348128	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTT	8650	0.3933420156572859	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCT	8211	0.3733793399493612	No Hit
CGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCT	6983	0.3175384156456448	No Hit
CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG	5035	0.22895688425831612	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTC	3877	0.1762990745321731	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3490	0.15870099822473152	No Hit
CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC	3442	0.15651829108582405	No Hit
CGTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC	3362	0.15288044585431157	No Hit
GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG	2290	0.10413331975204446	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	21750	90.33191	1
CGTAGGG	610	75.50082	2
ATAGGGC	1365	75.39922	3
TAGGGCA	860	73.2254	4
GAATAGG	1175	72.83926	1
AGTAGGG	3145	72.473045	2
ATAGGGA	1500	71.43302	3
GTAGGGT	865	70.08564	3
ACGGGTA	275	70.06588	4
AGGGATG	2900	69.8449	5
AGATAGG	1140	68.88801	1
ATAGAGG	1440	68.25206	1
AGGGAAT	2395	67.30448	5
AGTAAGG	1230	67.2883	1
GATAGGG	2700	66.837906	2
CGTTTCT	1290	66.710365	1
GCGTAGG	375	66.46249	1
TATAGGG	1645	66.27924	2
AGAGGGC	3320	66.10499	3
GTTTTTT	29890	66.06715	2