SRR3128014.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128014.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2685134
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	108224	4.030487863920385	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTT	8422	0.31365287542446674	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCT	8199	0.30534788952804587	No Hit
CGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCT	6579	0.24501570498902475	No Hit
CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG	5196	0.1935098955955271	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	4394	0.16364174003978946	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTC	3811	0.14192960202358615	No Hit
CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC	3501	0.13038455436488458	No Hit
CGTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC	3398	0.12654861917505794	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	29630	89.86898	1
TAGGGCA	1265	72.45437	4
ATAGGGC	1660	71.63627	3
CGTAGGG	835	70.36295	2
AGTAGGG	4080	69.92766	2
GAATAGG	1435	69.831726	1
AGGGATG	3325	69.68566	5
TAGAGGG	4515	68.08328	2
ATAGGGA	1955	67.79893	3
AGGGAAT	2730	67.485664	5
ACGGGTA	380	66.79295	4
ATAGAGG	1950	66.10602	1
GTTTTTT	40940	65.348785	2
ATAGGGT	1265	64.65159	3
ATGAGGG	3805	64.60521	2
TAGTAGG	1145	64.09795	1
GTAGGGA	1775	64.082214	3
GAGGGTA	1240	64.05979	4
AGTAAGG	1720	64.00479	1
AAGAGGG	8175	63.99232	2