SRR3128004.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128004.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2015287
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75882	3.765319778274757	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTT	6209	0.3080950752920056	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCT	6024	0.29891524135272046	No Hit
CGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT	5097	0.25291683020830286	No Hit
CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	3174	0.1574961779637342	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTC	2718	0.13486912782149638	No Hit
CGTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC	2458	0.12196773958250116	No Hit
CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC	2259	0.1120932155072702	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2161	0.10723038455564889	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	21915	90.1723	1
ATAGGGC	1415	75.72837	3
AGGGATG	3335	72.71668	5
TAAGGGA	1690	71.748566	3
GGTAAGG	1275	70.48368	1
TAGGGAT	1555	69.514854	4
ATAGGGA	1990	69.19819	3
ATAGCGG	330	68.43726	1
AGGGCGA	955	68.4056	5
TAGGGCA	965	68.18376	4
GAGGGAT	2430	67.49931	4
AGTAGGG	3135	67.48147	2
AGAGGGC	2895	67.2097	3
TAGAGGG	3235	66.558075	2
AAGGGAT	3330	66.05137	4
GTTTTTT	30210	66.028564	2
GTAGGGA	1615	65.47722	3
AGGGTAC	770	65.30903	5
TAGACGG	325	65.14701	1
GAGGGTA	1070	64.56747	4