SRR3128002.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3128002.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2310961
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94612	4.09405437824351	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCT	6443	0.2788017625567892	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTT	6303	0.27274367676477446	No Hit
CGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT	4995	0.2161438466508089	No Hit
CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTG	3324	0.14383626551897674	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTC	2965	0.12830160266659627	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2464	0.1066223099394581	No Hit
CGTCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC	2431	0.1051943325741975	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2336	0.10108348864390183	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	26900	90.40654	1
AGGGATG	4275	74.543076	5
ATAGGGC	1510	71.27921	3
AGGGAAT	2825	70.54418	5
ACGGGTA	305	69.3453	4
GAGGGAT	2990	69.00772	4
ATGCGGG	1160	68.47517	2
TAGGGAT	1875	68.43302	4
ATAGGGA	2285	68.08417	3
AAGGGAT	3815	67.88306	4
AGTAGGG	3735	67.82698	2
TAGGGCA	1160	67.25963	4
GTAGGGA	1795	66.7698	3
GGATGGC	3330	66.621056	7
GTTTTTT	36695	66.4888	2
GGTAAGG	1225	66.43112	1
TACGGGT	170	66.353935	3
AGAGGGC	3280	66.345505	3
GTAGGGT	905	65.956795	3
TAGAGGG	3775	65.73873	2