SRR3127997.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127997.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1030698
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10615	1.0298846024732755	No Hit
CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC	3202	0.310663259267021	No Hit
GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	3008	0.29184106304659563	No Hit
CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG	2831	0.27466823453620753	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	2475	0.2401285342554269	No Hit
AGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	1309	0.12700131367287024	No Hit
AAAGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTT	1181	0.11458254503258955	No Hit
CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT	1069	0.10371612247234399	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTACGG	165	85.52835	1
CGTTTTT	3215	85.30222	1
AGGGTAC	430	80.87896	5
AAGGGCG	410	80.23919	4
AGGGATG	2235	80.11609	5
AAGGGTA	865	77.69485	4
GTACGGG	285	77.50421	2
GAGGGAT	1490	76.961914	4
AGGGAAT	1875	76.699486	5
TAGGGCG	185	76.21174	4
TACGACC	475	76.185	6
TAGGGCA	455	75.40216	4
CGGGATG	425	75.19558	5
CGCTACG	490	74.81193	3
AGAGGGC	1395	72.76991	3
ACGGGTA	110	72.63209	4
AGTAAGG	635	72.598076	1
TAAGGGA	980	71.93455	3
AGGGCAT	930	71.75922	5
GGGAATG	2260	71.535614	6