SRR3127981.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127981.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2137525
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	94777	4.433959836727055	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTT	6038	0.28247622834820646	No Hit
CGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCT	5941	0.2779382697278394	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCT	5574	0.26076887989614156	No Hit
CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG	4058	0.1898457327984468	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	3445	0.16116770564086969	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTC	2742	0.12827920141284896	No Hit
CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC	2376	0.11115659465971159	No Hit
CGTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC	2281	0.10671220219646553	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2262	0.10582332370381632	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	25650	90.56963	1
GTAGGGA	1415	73.07725	3
AGTAGGG	3105	72.964485	2
AGGGATG	3290	72.85506	5
ATAGGGC	1280	71.237335	3
TAGGGTA	725	69.3684	4
GAGGGAT	2390	69.02797	4
AGGGAAT	2640	68.53971	5
TAGGGCA	985	67.75916	4
GTTTTTT	34610	67.22482	2
TAGGGAT	1365	67.14565	4
AGAGGGC	3025	67.12344	3
AGGGCAT	1555	67.09776	5
GTAGGGC	1210	66.42425	3
TAGAGGG	3635	66.205124	2
ATAGGGA	1900	65.307976	3
AAGGGAT	3195	65.02305	4
ATGAGGG	3065	64.86881	2
GTAAGGG	2805	64.84913	2
AGTTAGG	610	64.77097	1