SRR3127967.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127967.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2419361
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21858	0.903461699184206	No Hit
GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	3460	0.14301296912697198	No Hit
CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG	2954	0.1220983557228541	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2889	0.11941169589821445	No Hit
CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC	2806	0.11598103796828997	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	6675	82.99437	1
AGTAGGG	4010	72.43031	2
CGTAGGG	755	72.20833	2
ATAACGG	245	71.02157	1
ATAGGGC	1565	69.67066	3
AGGGTAC	1090	69.41714	5
ATAGCGG	470	68.040215	1
ACGGGTA	325	67.96304	4
GTAGGGA	2000	67.67664	3
CGAAGGG	2445	67.46904	2
AGAGGGC	3545	67.34785	3
AGGGAAT	3095	67.11644	5
TAGGGCG	505	67.0038	4
ACGGGAT	665	66.430046	4
TAGGGCA	1170	66.27602	4
ATAAGGG	3360	65.88065	2
AATAGGG	3860	65.74803	2
AGTAAGG	1440	64.9898	1
TAACGGG	820	64.76507	2
TAAGGGA	1840	64.62179	3