SRR3127955.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127955.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1883105
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	75740	4.022080553129008	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	6842	0.3633360858794385	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	6700	0.3557953486396138	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	6036	0.3205344364759267	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3888	0.20646750977773412	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTC	3207	0.17030383329660323	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC	2750	0.1460354042923788	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	2488	0.13212221304706853	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2233	0.1185807482854116	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	21195	90.00622	1
ATAGGGC	1130	78.18407	3
AGGGATG	2470	73.44526	5
TAGGGTC	485	72.67053	4
AGGGTAC	850	70.77249	5
ACGGGTA	240	70.490425	4
GATAGGG	2630	70.04372	2
AGATAGG	1070	69.01189	1
ATAGGGA	1585	68.78561	3
TACGGGT	130	68.682976	3
GAATAGG	1175	68.44887	1
AGAGGGC	2705	68.27538	3
ATGTAGG	550	67.55732	1
AAGGGTA	1190	67.52864	4
GTAGGGT	600	67.35751	3
TAGGGCA	685	67.231735	4
GGTAAGG	1085	66.75733	1
GAGGGAT	1790	66.68368	4
AGTTAGG	515	66.66896	1
TATAGGG	1255	66.6523	2