SRR3127954.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127954.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2336780
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	105924	4.532904252860774	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCT	7018	0.3003278015046346	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTT	6728	0.2879175617730381	No Hit
CGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCT	6008	0.2571059320945917	No Hit
CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTG	3878	0.16595486096252107	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTC	3349	0.14331687193488474	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC	2868	0.12273299155247819	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2747	0.11755492600929483	No Hit
CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC	2621	0.11216289081556671	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2424	0.10373248658410292	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	27915	90.283905	1
ATAGGGC	1490	75.38617	3
GTAGGGA	1675	72.39107	3
AGGGATG	3230	72.319016	5
TAGGGTC	670	72.25077	4
AGTAGGG	3710	71.57388	2
TAGGGTA	855	71.45906	4
GAATAGG	1495	71.435	1
ATAGCGG	460	69.546844	1
GTAGGGT	1020	68.65405	3
TAGAGGG	3820	67.913445	2
ATAGAGG	1560	67.85538	1
AGAGGGC	3020	67.851524	3
TAGGGAT	1305	67.70604	4
TAGGGCA	1005	67.34052	4
ATAGGGA	1835	67.103516	3
AAGGGTA	1555	67.09693	4
GAGGGAT	2380	66.942635	4
GTACGGG	415	66.81654	2
GTTTTTT	37915	66.750534	2