SRR3127953.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127953.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	817854
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8224	1.005558449307578	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4113	0.5029014958660103	No Hit
GCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG	2606	0.31863877904858323	No Hit
CCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG	2074	0.25359049414687707	No Hit
CTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC	2001	0.24466469565472565	TruSeq Adapter, Index 22 (95% over 21bp)
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	1330	0.16262071225426544	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT	974	0.11909216070349965	No Hit
AGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCT	926	0.11322314251687954	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGTC	824	0.10075147887031181	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	2705	86.80969	1
ATAGCGG	145	84.38014	1
AGGGATG	2910	83.8207	5
GCTACGA	740	81.92848	4
GGATGGC	2330	81.48964	7
TAGGGCG	185	81.29338	4
AGAGGGC	1210	81.17791	3
GTACGGG	180	80.9653	2
CGAGGGA	630	80.56755	3
GAGGGAT	1600	79.014946	4
GATGGCA	2220	78.95984	8
CGCTACG	775	78.834915	3
CGAAGGG	655	78.23389	2
AAGGGCA	1130	78.190926	4
TCCGCTA	785	77.9307	1
TACGAGG	170	77.507545	1
GGGCGAT	195	77.1245	6
TAGGGAT	1200	76.76297	4
AGGGCGT	190	76.68052	5
TAGGGCA	565	76.52729	4