SRR3127946.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127946.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1859637
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	59868	3.2193379675710907	No Hit
CGTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTT	4486	0.24122987443248334	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT	4405	0.23687418566096502	No Hit
CGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT	3765	0.20245886697242527	No Hit
CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTG	2757	0.14825474003797515	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTC	2180	0.11722717928283853	No Hit
CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC	2042	0.10980637619062215	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	1996	0.10733277515988335	No Hit
CGTCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC	1873	0.1007185810994296	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	17735	90.281906	1
TAGGGCA	765	72.485985	4
ATAGGGC	1055	72.15992	3
ATAGGGA	1645	70.84665	3
GAATAGG	1035	69.98787	1
AGTAGGG	2815	69.94701	2
AGGGATG	2635	69.73535	5
TATAGGG	1385	68.877884	2
GTACGGG	390	68.68213	2
GAGGGAT	2105	66.750206	4
GTAGGGA	1310	66.005486	3
GGTAAGG	1035	65.89767	1
TAGGGAT	1170	65.870575	4
TAAGGGA	1635	65.81899	3
AGGGATA	1580	65.7343	5
GATAGGG	2445	65.34819	2
CGTAGGG	410	65.33178	2
TAGTAGG	680	65.022156	1
AGTAAGG	1065	64.92473	1
ATAAGGG	2520	64.89515	2