SRR3127935.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127935.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1351737
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12678	0.9379043408592056	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8340	0.6169839251274472	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	3303	0.24435226675011487	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	3174	0.23480899021037374	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	2674	0.19781954625788892	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2281	0.16874584331123585	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGCT	1834	0.1356772804177144	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	1804	0.1334579137805653	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT	1393	0.10305259085162276	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGATG	5285	84.66015	5
GGATGGC	4800	84.499985	7
CGTTTTT	4185	83.86495	1
CGGGTAT	155	81.86894	5
GATGGCA	4710	81.6243	8
AAGGGAT	3915	80.79238	4
CGCTACG	1630	80.157524	3
ATAGCGG	300	79.98086	1
CGGGAAT	570	79.98048	5
GGAATGC	1575	79.97261	7
GCTACGA	1635	79.912384	4
ATGGCAC	4815	79.64912	9
GCGGGAT	815	79.00417	4
TAAGGGA	1695	78.74731	3
TACGAGG	210	78.41261	1
GGGATGG	5610	78.16383	6
GTAGGGT	410	77.94929	3
CGGGATG	990	77.85666	5
AGGGTAT	1060	77.592415	5
CGAGGGA	965	77.43849	3