SRR3127934.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127934.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1282788
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11509	0.897186440783668	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	8113	0.6324505686052566	No Hit
GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	3683	0.2871090156752324	No Hit
CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC	3305	0.2576419486306389	No Hit
CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG	2988	0.23293014901916761	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2098	0.16355001761787608	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT	1943	0.1514669610255163	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGCT	1822	0.14203438136309351	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT	1568	0.12223375959238783	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	3445	85.33929	1
GGATGGC	4315	84.30353	7
AGGGATG	4860	83.25984	5
GCTACGA	1660	82.10292	4
CGCTACG	1680	81.40524	3
CGGGTAT	175	80.56602	5
ATAGCGG	240	80.35832	1
TAGCGGG	570	79.97709	2
TCCGCTA	1725	79.898155	1
AGGGAAT	2400	79.89463	5
GATGGCA	4330	79.561264	8
GCGGGAT	890	79.20816	4
AGAGGGC	1935	78.44952	3
CTACGAC	1745	78.37296	5
AAGGGAT	3525	78.12808	4
ATGGCAC	4405	77.77987	9
GGGATGG	5065	77.75588	6
GGATGAC	2530	77.64999	7
AGGGTAT	980	77.20911	5
TAAGCGG	195	77.19222	1