SRR3127931.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127931.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	898641
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7590	0.8446086924589464	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4848	0.5394812834046075	No Hit
GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2947	0.3279396332907134	No Hit
CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG	2520	0.28042343939348413	No Hit
CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC	2483	0.2763061111166751	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT	1172	0.1304191551464934	No Hit
AGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT	1170	0.1301965968612605	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCTGG	1151	0.12808229315154773	No Hit
TAGACCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCT	1089	0.12118298630932708	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTAGGG	270	88.76748	2
GCGTAGG	145	87.5753	1
TAGGGCG	215	85.245926	4
CGTTTTT	2795	84.639305	1
CGCTACG	925	83.32006	3
AGGGATG	2670	81.31641	5
GCATAGG	215	80.937386	1
CTACGAC	945	80.56208	5
CGAGGGA	555	80.44112	3
TCCGCTA	965	80.416016	1
GCTACGA	955	80.210594	4
AGGGAAT	1865	79.122185	5
ATAGCGG	185	78.80901	1
AGGGCAT	750	78.32424	5
AGGGCGA	470	76.991066	5
CGACCAA	960	76.85995	8
CGAAGGG	805	76.47559	2
ACGACCA	965	76.46171	7
TACGACC	980	76.250496	6
AAGGGAT	2195	76.21894	4