SRR3127897.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127897.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1234047
Sequences flagged as poor quality	0
Sequence length	100
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13703	1.1104115159309167	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5951	0.4822344691895851	No Hit
CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC	4905	0.3974727056586986	No Hit
GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG	4748	0.38475033770999	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG	4654	0.37713312377891606	No Hit
AAAGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTT	1836	0.1487787742282101	No Hit
AGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT	1744	0.1413236286786484	No Hit
TAGACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCT	1466	0.11879612364845099	No Hit
ACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG	1346	0.1090720207577183	No Hit
CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT	1265	0.10250825130647374	No Hit
ACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT	1247	0.10104963587286384	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4105	86.19511	1
TATCGGG	110	85.45547	2
CGCTACG	1150	84.600914	3
GCTACGA	1155	84.23467	4
AGGGATG	3395	84.168335	5
ATAGCGG	200	82.34097	1
GGATGGC	2530	80.62211	7
TCCGCTA	1240	80.44371	1
CTACGAC	1225	79.418045	5
TACGACC	1225	79.03438	6
AGGGTAT	905	78.936874	5
GTAGGGC	605	78.46366	3
CGACCAA	1215	78.137596	8
AAGGGCG	560	78.05441	4
AGGGAAT	2650	78.035416	5
CGAGGGA	715	77.56727	3
GAGGGAT	2660	77.391815	4
GATGGCA	2430	77.17055	8
CGTAGGG	325	76.64697	2
GCGAGGG	890	76.57386	2