SRR3127872.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127872.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2344644
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	69309	2.956056441830828	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	6508	0.27756879082709357	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT	5782	0.24660460180735327	No Hit
CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT	5703	0.24323522035754683	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	4809	0.20510576445720544	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	3821	0.16296717113557538	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC	2774	0.11831220432611518	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	2695	0.11494282287630873	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC	2548	0.1086732143557828	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	21605	89.465126	1
AGGGATG	4175	77.44682	5
ATAGGGC	1635	74.44811	3
GAGGGAT	3045	72.849464	4
AGGGAAT	2685	71.93979	5
GAATAGG	1370	70.42334	1
AGTAGGG	3620	69.61814	2
TAGGGCA	1150	69.47407	4
AGGGTAC	925	68.59046	5
AGGGACT	2310	68.15606	5
TAAGGGA	2185	67.75335	3
AGTAAGG	1455	67.6031	1
GGATGGC	3790	66.961655	7
AAGGGAT	3855	66.92982	4
ATGAGGG	3690	66.76842	2
AGATAGG	1195	66.55829	1
TAGAGGG	3935	66.554375	2
GTAGGGT	1060	66.50542	3
AGAGGGC	3470	66.50031	3
TAGGGAT	1855	66.378746	4