SRR3127870.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127870.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2731156
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	89029	3.2597552098818228	No Hit
CGTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT	7030	0.25740016315435665	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT	6381	0.23363733159145797	No Hit
CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT	5938	0.2174170937141635	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	5740	0.21016741628819444	No Hit
CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG	4331	0.15857754005995994	No Hit
CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC	3111	0.11390781046560505	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC	2926	0.10713412196154302	No Hit
CGTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC	2845	0.10416834483273749	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	26610	89.88289	1
AGGGATG	4975	78.88491	5
TAAGGGA	2365	72.33607	3
ATAGGGC	2005	71.72849	3
GTAGGGA	2170	71.68907	3
AGGGAAT	3250	71.58507	5
GAGGGAT	3675	71.48898	4
CGTAGGG	915	71.396736	2
AGGGTAC	1055	70.834564	5
ATAGGGA	2490	69.45974	3
AGTAAGG	1655	68.520546	1
AGTAGGG	4475	68.05604	2
TAGGGCA	1415	67.75766	4
GAATAGG	1545	67.61239	1
GGATGGC	4365	67.51245	7
TAGGGAT	2110	67.2681	4
AAGGGTA	1935	66.79384	4
AAGGGAT	4605	66.645096	4
TAGAGGG	4630	66.58977	2
AGAGGGC	3825	66.35093	3