SRR3127869.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127869.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2117000
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	84910	4.010864430798299	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCT	7814	0.3691072272083136	No Hit
CGTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTT	7641	0.36093528578176665	No Hit
CGCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCT	6822	0.32224846480869157	No Hit
CCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTG	3631	0.17151629664619747	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTC	3310	0.15635333018422296	No Hit
CGTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTC	3015	0.14241851676901277	No Hit
CTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGC	2355	0.11124232404345771	TruSeq Adapter, Index 15 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	23685	89.673775	1
GTAGGGT	740	73.6717	3
TAGGGTA	610	73.192764	4
AGTAGGG	3045	70.70749	2
TAGGGCA	895	69.839806	4
ATAGGGC	1225	69.8248	3
ACGGGTA	210	69.377205	4
TAGAGGG	3475	68.992615	2
ATAGGGA	1515	68.24714	3
AGGGATG	2660	68.022644	5
ATGTAGG	640	66.166756	1
GAATAGG	1125	66.081795	1
ACGGGTC	200	65.79645	4
GTTTTTT	32630	65.60897	2
TAAGGGA	1800	65.274254	3
TGTAGGG	1355	65.223755	2
AGGGAAT	2080	65.07341	5
TATAGGG	1540	65.019875	2
AGGGACT	1985	64.87307	5
GGTAAGG	1190	64.84465	1