SRR3127867.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127867.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2451051
Sequences flagged as poor quality	0
Sequence length	100
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	107948	4.404151525202861	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCT	8496	0.34662681437473153	No Hit
CGTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTT	8184	0.33389758107848433	No Hit
CGCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCT	7009	0.28595896209422	No Hit
CCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTG	4172	0.17021269651263887	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTC	3780	0.15421955724299494	No Hit
CGTCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTC	3381	0.13794082620067882	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2578	0.10517936999270924	No Hit
CTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGC	2549	0.10399620407735295	TruSeq Adapter, Index 15 (95% over 21bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	29105	89.89147	1
ATAGGGC	1460	76.295	3
TAGGGCA	1175	73.20046	4
TAGGGTA	705	70.667114	4
AGGGATG	3460	70.09436	5
AGTAGGG	3635	70.08022	2
TAGAGGG	4110	69.07099	2
GTAGGGT	875	68.217575	3
AGATAGG	1345	67.49788	1
GTTTTTT	39375	66.630005	2
AGGGAAT	2450	65.9936	5
GAGGGAT	2545	65.19098	4
GGTAAGG	1350	65.15729	1
AAGGGTA	1510	65.05338	4
ATAGGGA	1780	64.95547	3
AGAGGGC	3205	64.81788	3
GAATAGG	1350	64.80885	1
GATAGGG	3600	64.75597	2
GTAGGGA	1510	64.74213	3
TAGGGTC	690	64.71055	4