SRR3127850.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127850.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1612006
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12514	0.7762998400750369	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	11084	0.6875904928393567	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	4553	0.28244311745737916	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3878	0.24056982418179584	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3674	0.2279147844362862	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	2889	0.1792176952194967	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGGT	2365	0.14671161273593275	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	2149	0.13331215888774609	No Hit
TAGACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	1758	0.10905666604218595	No Hit
AGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	1684	0.10446611240901088	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4115	86.611984	1
CGCTACG	1705	85.16942	3
AGGGATG	5230	83.56623	5
GCTACGA	1805	80.9716	4
CGGGTCA	100	79.89111	5
CTACGAC	1830	79.86544	5
GGATGGC	4170	78.77541	7
AGGGAAT	2730	78.66891	5
TCCGCTA	1875	78.491325	1
CGAGGGA	1025	77.94255	3
CGGGATG	1080	77.88949	5
CGGGTAT	175	77.87705	5
TAAGCGG	360	77.059845	1
AAGGGAT	4440	76.52527	4
AGGGCAT	1360	76.02096	5
ACGACCA	1870	75.8953	7
GATGACC	2645	75.8668	8
GATGGCA	4025	75.54191	8
CGACCAA	1895	75.39003	8
TAGCGGG	680	75.32986	2