SRR3127849.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127849.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2013036
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18250	0.9065908408990202	No Hit
TCCGCTACGACCAACTCATACACCTCCTATGAAAAAACTTCCTACCACTC	14425	0.7165793358886776	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	4554	0.22622546243584318	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	4101	0.20372213909736336	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3910	0.1942339828994613	No Hit
GGTACTGAACCTACGAGTACACCGACTACGGCGGACTAATCTTCAACTCC	3846	0.19105470543000722	No Hit
TCCGCTACGACCAACTCATACACCTGTCTCTTATACACATCTGACGCGGT	2560	0.12717109877816393	No Hit
AAAGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	2327	0.11559654174093259	No Hit
AGGGACCTGTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTA	2146	0.10660514764763274	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	5985	85.68391	1
CGCTACG	2365	84.65895	3
AGGGATG	6880	83.34236	5
TCCGCTA	2480	81.00524	1
ACGACCA	2390	80.82363	7
GCTACGA	2470	80.67952	4
CTACGAC	2485	80.00339	5
TAGCGGG	835	79.36661	2
GGATGGC	5620	79.11325	7
CGACCAA	2445	79.00551	8
CGGGATG	1320	78.33271	5
CGTAGGG	595	78.203	2
CGAGGGA	1265	78.023094	3
AAGGGCG	835	77.676025	4
AAGGGAT	5775	77.559555	4
GATGGCA	5370	76.58226	8
TAGGGCA	1320	76.55242	4
AGGGCGA	1040	76.37439	5
AGGGCAT	1890	75.84596	5
TAGGGCG	435	75.631584	4