SRR3127836.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3127836.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1852247
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62482	3.3733082034955384	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCT	4790	0.2586048189037423	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT	4658	0.2514783395519064	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT	3954	0.21347044967544826	No Hit
CCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTG	2589	0.13977617455987243	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTC	2236	0.1207182411417052	No Hit
CGTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC	2090	0.11283592307073517	No Hit
CTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTGC	1922	0.10376585844112585	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	19200	89.34385	1
ATAGGGC	1130	73.61674	3
ATAGGGA	1680	71.616394	3
AGGGATG	2670	70.40938	5
ACGGGTA	135	69.627045	4
ATGTAGG	525	68.127525	1
AATAGGG	2705	67.61087	2
AGAGGGC	2890	66.838356	3
AGGGTAC	805	66.55654	5
AGTAGGG	2965	66.12193	2
GAATAGG	1210	66.11986	1
GATAGGG	2555	65.69185	2
AGGGAAT	1745	65.1781	5
TAGCGGG	925	65.05826	2
TAGTAGG	840	64.99008	1
GGATAGG	1050	64.990074	1
ATAGCGG	400	64.70995	1
AGATAGG	1005	64.62215	1
AAGAGGG	6235	64.62173	2
TAGGGCG	390	63.869427	4